Algorithms for reproducible bioinformatics (Koesterlab) (@koesterlab)
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koesterlab

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  • Stars
    star
    49
  • Global Org. Rank 80,443 (Top 26 %)
  • Registered about 8 years ago
  • Most used languages
    Python
         66.7 %
    Rust
         33.3 %
  • Location 🇩🇪 Germany
  • Country Total Rank 103,688
  • Country Ranking
    Rust
         411
    Python
         6,545

Top repositories

1

alignoth

Creating alignment plots from bam files
Rust
44
star
2

microphaser

Rust
12
star
3

setup-slurm-action

A github action to setup a small SLURM cluster for testing purposes.
8
star
4

fp-rust-wavelet-trees

Rust
7
star
5

data-science-for-bioinfo

A collection of resources for data scientists (not only) in bioinformatics
6
star
6

calfreeslots

A small command line utility for printing free calendar slots in the coming days
Python
5
star
7

nanopore-qc

A quality control pipeline for Oxford Nanopore sequencing
Python
3
star
8

conda-inject

Helper functions for injecting a conda environment into the current python environment (by modifying sys.path, without actually changing the current python environment)
Python
1
star
9

ngs-fastq-to-cram

Snakemake workflow for converting FASTQ files to self-contained CRAM files with maximum lossless compression.
Python
1
star
10

fp-snakemake-2018

Fachprojekt Reproduzierbare Datenanalyse mit Snakemake am Beispiel der Bioinformatik
1
star
11

locosopa

A github action for creating software homepages with low code.
Python
1
star
12

srptn

SeRPentine - the Snakemake research platform
Python
1
star