Institut de Génomique (@institut-de-genomique)
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institut-de-genomique

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Top repositories

1

Ultimate-DataTable

This AngularJS directive generate a HTML table with build-in fonctionnality like save, edit, remove, pagination etc...
JavaScript
45
star
2

Gmove

Gmove is a gene prediction tool
C++
20
star
3

HAPO-G

Hapo-G is a tool that aims to improve the quality of genome assemblies by polishing the consensus with accurate reads.
C
20
star
4

NaS

NaS is a hybrid approach developped to take advantage of data generated using MinION device. We combine Illumina and Oxford Nanopore technologies to produce NaS (Nanopore Synthetic-long) reads of up to 60 kb that aligned with no error to the reference genome and spanned repetitive regions.
Perl
15
star
5

hibernatetools-gradle-plugin

Hibernate tools plugin to reverse engineering database from gradle
Groovy
14
star
6

BoardION

C++
10
star
7

biscot

Bionano SCaffolding Correction Tool
Python
9
star
8

Pahang-associated-data

This repository contains all the scripts used to produce the paper's figures
Python
9
star
9

fastxtend

A package to perform NGS quality control
C++
4
star
10

MaGuS

MaGuS (Map-Guided Scaffolding) is a map-guided scaffolder and a reference-free assembly quality evaluator.
Perl
4
star
11

obo-parser

A java parser for obo file format as provided by unipathway
Java
3
star
12

orthodotter

Synteny plots (oxford grid)
Perl
3
star
13

saturn

A tool for assessing the library saturation without alignment
C++
2
star
14

LocoGSE

A tool to estimate the genome size
Python
2
star
15

TaraPacific_Pocillopora-transcriptomic

Transcriptomic plasticity and symbiont shift underpin Pocillopora acclimatization across heat-stress regimes in the Pacific Ocean
R
1
star
16

Kfir

C++
1
star
17

bamFilters

A tool to filter BAM files
C
1
star