Explore @imodpasteur Open Source projects

@imodpasteur

imodpasteur

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Registered about 10 years ago
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Java
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JavaScript
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Location 🇫🇷 France
Country Total Rank 2,102
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Jupyter Notebook
525

Java
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Python
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ANNA-PALM

Accelerating Single Molecule Localization Microscopy with Deep Learning

ZOLA-3D

Zernike Optimized Localization Algorithm for 3D single molecule localizations

Brightfield-Drift-Correction-3D

Acquire bright field images along with the super resolution data and use it to track drift in 3D with nanometer precision!

CompressedSensingMicroscopy3D

Reconstruction notebooks for the paper "Simple 3D compressed sensing scheme for faster and less phototoxic fluorescence microscopy imaging"

Jupyter Notebook

pySPIRALTAP

Sparse Poisson Intensity Reconstruction ALgorithms

Jupyter Notebook

Anet-ImageJ

An ImageJ/FIJI plugin for running Anet, for processing images with ANNA-PALM and other models in ImageJ/FIJI.

smlm-file-format

A portable and extendable file format for storing and sharing localization microscopy data.

ShareLoc.XYZ

A platform for sharing localization microscopy data.

ArduinoCompressedSensing

A compressed sensing plugin for MicroManager to perform compressed sensing acquisitions

mnist-deep-learning-tutorial

Jupyter Notebook

shareloc-collection

RDF Collection for ShareLoc.XYZ

RNNtrajAnalysis

Jupyter Notebook

QuickPALM

A 3D real-time PALM/STORM image processing plugin for ImageJ

VoroQuant

A 3D-voronoi-based python program to quantify SMLM data

LoopExtrusion

A tool to simulate loop extrusion in chromatin