hackseq - Archived (@hackseq)
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hackseq

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  • Stars
    star
    87
  • Global Org. Rank 61,735 (Top 20 %)
  • Registered almost 9 years ago
  • Most used languages
    HTML
         35.3 %
    Python
         29.4 %
    R
         17.6 %
    Jupyter Notebook
         11.8 %
    Makefile     5.9 %
  • Location ๐Ÿ‡จ๐Ÿ‡ฆ Canada
  • Country Total Rank 5,998
  • Country Ranking
    Makefile     104
    R
         222
    HTML
         994
    Jupyter Notebook
         1,815
    Python
         5,883

Top repositories

1

hackseq19

hackseq 2019 - [*]-omics hackathon. Vancouver, BC
9
star
2

hackseq_projects_2016

8
star
3

modular-assembly-hs18

Mix and match modular genome assembler components
Makefile
8
star
4

hackseq18

hackseq 2018 - [*]-omics hackathon. Vancouver, BC
7
star
5

October_2016

Planning repository for Genomics Hackathon in Vancouver
R
6
star
6

vasco

Visualization of single cell RNA-seq data from tens of thousands of cells in real time
R
6
star
7

hackseq_projects_2017

6
star
8

hackseqRNA

hackseqRNA <- hackseq + RNA.society2020
4
star
9

hs19-var

Visualizing single-cell RNA-seq experiments at a life-size scale in 3-D
HTML
3
star
10

tara-cyc-hs18

HTML
3
star
11

hackseq_2017

Public files and discussions about hackseq 2017
3
star
12

2017_project_8

Analysis of tested guide RNAโ€™s used for gene editing via CRISPR to predict optimal future guide sequences
Jupyter Notebook
3
star
13

2016_project_2

Design a tool to optimize the parameters of any command line tool
HTML
2
star
14

2016_project_6

Inferring sex chromosome and autosomal ploidy in NGS data
Python
2
star
15

2016_project_4

Pseudo-WGS variant calling for common cell types aggregating ChIP-seq, RNA-seq and DHS from ENCODE and Roadmap Epigenomics data
Jupyter Notebook
2
star
16

2016_project_9

Selection of tag SNPs for an African SNP array by LD and haplotype based methods
Python
2
star
17

hs19-flu

R
1
star
18

hs19-deep

Python
1
star
19

2016_project_5

Evaluating epigenetic modifications in ChIP-seq and methylation data across cell types and states.
HTML
1
star
20

hs19-trends

hackathon project on the trends in bioinformatics
HTML
1
star
21

Indicator_contig_predictor

A two-way classifier to characterize metagenomes based on short and long read technologies
Python
1
star
22

2016_project_8

Explore the use of 10x Genomics' Linked-Reads to unlock currently inaccessible parts of the genome
Python
1
star
23

2017_project_5

Developing advanced R tutorials for genomic data analysis
HTML
1
star