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Gurdon Institute (@gurdon-institute)

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Filopodyan

An ImageJ/R pipeline for filopodia dynamics analysis

HKM-Segment

Hierarchical K-Means Segmentation

Two_Cells

Selects best focussed slice and segments 2 cells from C2 (DIC) in a 5D stack. Segments a nucleus in each cell if one is labelled in C1. Measures C1 mean intensity over time for each cell and nucleus.

Surrounding_Blobs