Giorgino Laboratory (@giorginolab)
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giorginolab

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  • Stars
    star
    180
  • Global Org. Rank 42,765 (Top 14 %)
  • Registered over 5 years ago
  • Most used languages
    Jupyter Notebook
         27.8 %
    Python
         22.2 %
    Tcl     16.7 %
    HTML
         11.1 %
    Perl
         5.6 %
    Shell
         5.6 %
    Gnuplot     5.6 %
    Rich Text Format     5.6 %
  • Location ๐Ÿ‡ฎ๐Ÿ‡น Italy
  • Country Total Rank 1,283
  • Country Ranking
    Gnuplot     2
    Tcl     2
    Rich Text Format     11
    Perl
         51
    Python
         412
    Jupyter Notebook
         644
    HTML
         1,085
    Shell
         1,511

Top repositories

1

zotfile_doctor

Zotfile directory consistency checker
Python
75
star
2

vmd_density_profile

Computing 1-D atomic densities in macromolecular simulations: The density profile tool for VMD.
Tcl
31
star
3

vmd_diffusion_coefficient

Computing Diffusion Coefficients in Macromolecular Simulations: The Diffusion Coefficient Tool for VMD
Tcl
30
star
4

vmd_plumed

Main code repository for the PLUMED-GUI plugin for VMD
Tcl
15
star
5

miniomm

A simple OpenMM wrapper for common-case MD runs
Python
5
star
6

vmd_misc

Development branch - not for general use
Perl
4
star
7

openmm-plumed-tests

Alanine dipeptide OpenMM-Plumed test
Rich Text Format
3
star
8

ACEMD-PLUMED

Running biased simulations with PLUMED and ACEMD
Gnuplot
2
star
9

analysis_libraries_chapter

Analysis libraries for molecular trajectories: a cross-language synopsis
Python
1
star
10

CHARMM_GUI_GROMACS_5_fixup

Fixup for CHARMM-GUI and GROMACS5
Shell
1
star
11

2017-PLUMED-workshop

Raw material for the presentation at the PLUMED 2017 workshop in Trieste
Python
1
star
12

2019-Markov-Tutorial-UniMi

Material for the Markov + MD Lecture @ Unimi
HTML
1
star
13

2021-Markov-Tutorial-BCN

Material for the Markov + MD Lecture @ Master MSI Barcelona
Jupyter Notebook
1
star
14

2022-MD-Trajectory-Tutorial-UniPD

For Prof. Fuxreiter's course
Jupyter Notebook
1
star
15

2023-Markov-Tutorial-UniPD

Markov tutorial for prof. Fuxreiter's course.
Jupyter Notebook
1
star
16

2020-Markov-Tutorial-BCN

Material for the Markov + MD Lecture @ Master MSI Barcelona
Jupyter Notebook
1
star
17

2019-Markov-Tutorial-BCN

Material for the Markov + MD Lecture @ Master MSI Barcelona
HTML
1
star
18

2019-PlumedAutoDiff-Lugano

Code accompanying my talk at *Open source software for enhanced-sampling simulations*
Jupyter Notebook
1
star
19

2023-OpenMM-MD-UniPD

For prof. Fuxreiter's Course
1
star