Explore @gigascience Open Source projects

GigaScience Journal (@gigascience)

gigascience

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paper-bray2017

Source code from Bray et al., (2017) A dataset of images and morphological profiles of 30,000 small-molecule treatments using the Cell Painting assay.

paper-zhang2014

Source code from Zhang et al., (2014) Genomic data of avian phylogenomics project. GigaScience 3:26

gigadb-website

Source code for running GigaDB

papers

bgi-soap2

Source code and binaries for the SOAP2 alignment tool developed by BGI.

paper-ho2015

Source code from Chiu and Hsu, (2015) Determination of Nonlinear Genetic Architecture using Compressed Sensing.

paper-xiong2016

cuddel-gsk-dataset

Reproducibility study on a metabolomics dataset

paper-jarvis2014

Source code from Jarvis et al., (2015) Phylogenomic analyses data of the avian phylogenomics project. GigaScience 4:4.

paper-kilianski2015

Source code for Kilianski et al., (2015) Bacterial and viral identification and differentiation by amplicon sequencing on the MinION nanopore sequencer. GigaScience 4:12

gigascience.github.io

paper-chen2014

cms

CMS software for GigaScience

paper-zaritsky2015

Source code from Zaritsky et al., (2015) Live time-lapse dataset of in vitro wound healing experiments. GigaScience 4:8

gigadb-hkust

Experimental website created by HKUST project students

gigadb-wordpress

Source code for the WordPress-based version (1) of GigaDB.

galaxy-smilefinder

Galaxy wrappers for the SmileFinder set of tools.

galaxy-tools-contiguator

paper-monsarrat2017