Explore @gao-lab Open Source projects

Gao Lab (@gao-lab)

gao-lab

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Registered about 7 years ago
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Python
64.7 %

Jupyter Notebook
11.8 %

R
5.9 %

C
5.9 %

Perl
5.9 %

Cuda 5.9 %
Location 🇨🇳 China
Country Total Rank 6,517
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Cuda 243

Perl
465

R
793

Python
1,203

Jupyter Notebook
2,888

C
5,443

GLUE

Graph-linked unified embedding for single-cell multi-omics data integration

Guideline-for-Computational-Biology-and-Bioinformatics

Cell_BLAST

A BLAST-like toolkit for large-scale scRNA-seq data querying and annotation.

SLAT

Spatial-Linked Alignment Tool

ePooling

Expectation pooling: An effective and interpretable method of pooling for predicting DNA-protein binding

CPC2_standalone

Official repo for the standalone package of Coding Potential Calculator (CPC) 2.

vConv

An implementation of vConv layer.

kernel-to-PWM

LOST_and_FOUND

RiboCalc

RiboCalc data and script

SLE-ImmuneAtlas

scRNA and scVDJ analysis for SLE samples

Jupyter Notebook

Markonv_figures

Markonv: a novel convolutional layer for identifying inter-positional correlations effectively and efficiently This is the repository for reproducing figures and tables in the paper.

Cell_BLAST-notebooks

Jupyter notebooks for Cell BLAST

Jupyter Notebook

Markonv

core code of Markonv layer and Markonv operator

vConv-Figures_and_Tables

The repository for reproducing figures and tables in the vConv paper

FunTFBS

A package to identify functional TFBS

CARMEN

The Standalone package of CARMEN

HERE

Human Embryonic RNA Editome