Computational and Statistical Genomics Lab (@csglab)
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csglab

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  • Stars
    star
    46
  • Global Org. Rank 82,757 (Top 27 %)
  • Registered over 8 years ago
  • Most used languages
    R
         60.0 %
    HTML
         20.0 %
    C++
         10.0 %
    Shell
         10.0 %
  • Location 🇨🇦 Canada
  • Country Total Rank 9,001
  • Country Ranking
    R
         107
    HTML
         760
    Shell
         1,425
    C++
         2,184

Top repositories

1

GEDI

Gene Expression Decomposition and Integration
HTML
14
star
2

REMBRANDTS

REMoving Bias from Rna-seq ANalysis of Differential Transcript Stability
R
13
star
3

DiffRAC

A flexible R function for comparing response proportions in sequencing count data
R
8
star
4

CRIES

Counting Reads for Intronic and Exonic Segments
R
7
star
5

RCADE2

Recognition Code-Assisted Discovery of regulatory Elements v2
C++
5
star
6

MPAQT

Shell
5
star
7

PhantomPurgeR

R package for the optimal purging of phantom molecules by the robust estimation of the sample index hopping rate in multiplexed droplet-based single-cell RNA-seq data
R
3
star
8

phantom_purge

Please go to https://github.com/csglab/PhantomPurgeR
R
3
star
9

JAMS

Quantitative modeling of sequence, DNA accessibility, and methylation preferences of transcription factors using ChIP-seq data.
R
2
star
10

transcriptional_reprogramming_muscle_cells

Dynamics of niche mediated transcriptional reprogramming of muscle stem cells
HTML
1
star