centre for the mathematical modelling of infectious diseases (@cmmid)
Guthub

cmmid

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  • Stars
    star
    251
  • Global Org. Rank 35,735 (Top 12 %)
  • Registered over 8 years ago
  • Most used languages
    R
         77.3 %
    HTML
         22.7 %
  • Location πŸ‡¬πŸ‡§ United Kingdom
  • Country Total Rank 4,856
  • Country Ranking
    R
         50
    HTML
         442

Top repositories

1

covid-uk

Scenario analyses for COVID-19 outbreak in the United Kingdom
R
64
star
2

ringbp

R
53
star
3

cmmid.github.io

HTML
32
star
4

covid-age

Analysis code and data for COVID-19 age-specific clinical fraction
R
21
star
5

hhh4-workshop

Workshop on hhh4 and the endemic-epidemic framework
HTML
15
star
6

pcr-profile

R
10
star
7

covidm_reports

LMIC reports using the covidm model framework
R
10
star
8

SA2UK

R
9
star
9

CovidItalyNow

Temporal variation in transmission in Italy during the COVID-19 outbreak
HTML
7
star
10

CovidGlobalNow

Temporal variation in transmission during the COVID-19 outbreak
R
6
star
11

SoftwareChatter

Software engineering discussion group resources
HTML
4
star
12

screening_outbreak_delay

R
4
star
13

quar_test_contact_tracing

R
3
star
14

vaxco

R
3
star
15

MTM-2023

MTM material, 2023 (package) version
R
2
star
16

epinow2_hpcarray

used for R estimation supporting covidm_reports repository analysis
R
2
star
17

uk_movement_communities_covid

Repository of code for the publication: "Detecting behavioural changes in human movement to inform the spatial scale of interventions against COVID-19." Gibbs et al. 2021.
R
2
star
18

paramix

a package for aggregating parameters and disaggregating outcomes from compartmental models
R
2
star
19

coronavirus_immunity

code for paper - fitting seasonal coronavirus and simulating covid
R
1
star
20

uk_fb_population_estimation

Repository for source code to estimate population changes in the UK with Facebook population data
R
1
star
21

covid_quar_test_import_risk

R
1
star
22

colocation_dashboard_cmmid

Interactive dashboard of Facebook colocation data
HTML
1
star