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Computational Biology Berlin (@charite)

charite

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jannovar

Annotation of VCF variants with functional impact and from databases (executable+library)

Q

Q ChIP-seq peak caller

asdpex

ngspipeline

Our NGS Pipeline using Nextflow

charite.github.io

Charité Computational Biology Website

hyperSMURF

Weka implementation of hyperSMURF using EasyEnsemble and SMOTE

denovocaller

Denovo Variation Caller for simple familie trios (mother, father, affected child)

jannovar_example_app

Minimal Maven application using Jannovar

jannovar_tutorial

Jannovar Tutorial Applications

topodombar

Phenotypic analysis of microdeletions and toplogical chromosome domain boundaries