DeepWAS

DeepWAS: Directly integrating regulatory information into GWAS using machine learning

kimono

KiMONo is a network inference tool for multi-omics datasets. The multi-omics network is calculated by sparse-group-LASSO regression and can incorporate prior biological information using protein-protein Interactions.

longmixr

misina

Misina: Finding microRNA-mediated effects of genetic variants with an integrative approach

ImmuneDepressionSymptoms