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Borevitz Laboratory (@borevitzlab)

borevitzlab

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spc-eyepi

Raspberry PI DSLR control code

3D-tools

A set of tools for dealing with point clouds representing a forest. Basic object recognition and extraction, calculation of spatial and spectral attributes, automation of data processing, etc.

timestreamlib

DEPRECATED. Please use the current version of the TimeStream tools at https://gitlab.com/appf-anu/pyts2.

forestUtils

Tools for 3D rendering of forest. New version of 3D-tools; name changed so it doesn't start with a number

GBSFilteR

R scripts to filter Genotyping by Sequencing data from the TASSEL pipeline

traitcapture-bin

Programs, scripts, etc. forming part of the TraitCapture Genotype-Phenotype-Environment analysis suite

timeplayer-9000

HTML5 timelapse player

SpectralPhenoClimatron-imaging

Image analysis code for the SpectralPhenoClimatron

DEM-o-matic

Creates synthetic digital elevation models (DEMs) from point data.

spc-timestreamui

A web visualisation of timestreams of the SpectralPhenoClimatron

Gigavision

A modular system for acquiring images from cameras on a schedule

SpectralPhenoClimatron-control

Control software for the conviron growth chambers and heliospecta LED arrays

traitcapturedb

The database behind the TraitCapture integrative phenomics platform.

spc-testimages

Test images and timestreams for the SpectralPhenoClimatron and TraitCapture pipelines

PhenoSnapVB

Leaf Scanner code

exif2timestream

DEPRECATED. Please use the current version of the TimeStream tools at https://gitlab.com/appf-anu/pyts2.

py-stitcher

A python panorama stitcher that uses the Gigapan Stitcher for stitching time streams.

fieldwork-sampling-tools

Fieldwork and plant sampling management helpers

py-eyepi

tool to capture images from dslrs and raspberry pi cameras