dicoogle
Dicoogle - Open Source PACSGenericCDSS
GenericCDSS is a web-based application, which provides the main dashboard where professionals (e.g, practitioners, nurses) can follow all the patients that are under their responsibility and some details about the state of each one.taska
Workflow Management for Biomedical explorationDrAC
Extracting Patients' information from clinical notes and export them to an OMOP CDM database.COEUS
COEUS: Semantic Web Application FrameworkBIcenter
A web-based platform that allows the building and management of ETL pipelines in a multi-institution environment.dicoogle-learning-pack
Resources for users and developers of Dicooglegimli
Gimli is now part of Neji.scaleus
Semantic Web Services Integration for Biomedical Applicationsdicoogle-plugin-sample
Dicoogle Plugin - Samplemontra
Public release of Montra (previously called Catalogue). EMIF Catalogue is backed by Montra.dicoogle-client-js
Dicoogle Client - JavascriptPatientTM
Patient trajectory modeling solution for clinical outcome predictionimageclef-toolkit
A toolkit for the research group's participations on the ImageCLEF challengesCMToolkit
The Cohort Migration ToolkitPatientFM
Patient Family History extraction toolneji
Flexible, easy and powerfull framework for faster biomedical concept recognition.biocreativeVII_track2
BioCreative VII NLM-Chem track: full-text chemical identification and indexing in PubMed articlespolus
Diseasecard
Rare Diseases Portal using COEUS frameworkmidas
MIDAS is a multi-framework DataLoader that can be leverage to produce highly efficient data pipelinesBIcenter-AD
A web solution to harmonise different Alzheimer's Disease cohorts into a standard data schema, using ETL processes in a multi-institution environment.trigner
Trigger recognition for event mining.GDI_Pipeline
A Pipeline for comparing GATK and Deepvariantdicoogle-api
Dicoogle API website source code and generation scriptsdicoogle-java
Dicoogle Webservices Wrapper for JavaAchillesLite
Python tool to extract relevant information from Achilles to be used in the EHDEN Network DashboardsEACL2021-reproducibility
mRNA-Optimiser
Console application to redesign mRNA nucleotide sequences (given as text strings) to enhance its secondary structure in terms of minimum free energyCOMPACT
Compressor Benchmark Taxonomic ClassificationMicroGES
R solution to identify gene expression signatures in microarray datasetsSecureFASTA
Tool for encrypt and decrypt fasta files to be send in a insecure communication channelPPSE
Posterior Playfair Searchable Encryption (PPSE)ann2rdf
Semantic layer to convert multiple annotations files into RDF datadicoogle-python
Dicoogle Webservices Wrapper for PythonEugene
EuGene is a synthetic gene redesign software.BioKBQA
BioKBQA - Biomedical Knowledge Base Question Answeringmontra-client-python
Montra Webservices Wrapper for PythonBioASQ
Deep architectures for biomedical question answeringi2x
i2xjdicomanonymizer
Application to anonymize DICOM files. It can be used as a standalone application or libraryBackupUploader
EnchyBASE
Enchytraeus Albidus Databasei2x-client
i2x client agentWAVe
Web Analysis of the Variomejquery-booleanquerywidget
It is a jquery plugin to build boolean queries in javascriptcoeus-python
COEUS Python Clientdicoogle-mongo-plugin
Mongo DB Plugin for Dicoogle. It uses the MongoDB to File Storage and also for query.TranSMART-migrator
A solution for migrating patients' information from the OMOP CDM database to TranSMART structure.GeoDropdown.js
Geo Dropdown component for javascriptArcadeBattle
Serious games for hand arthritis rehabilitationdicoogle-couchdb-plugin
Dicoogle CouchDB Pluginscaleus-fair
scaleus-python
SCALEUS Python ClientPEI-detector-models
A list of models capable of detect computed-generated text from humanBioAnswer
BioAnswerPrivacyCDM
Privacy preserving techniques applied to OMOP CDMbiodata-starter-kit-se-deployment-notes
Documentation of deployment of the GDI starter kit in Portuguese nodeKNOWLAM
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