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@bioinfo-biols

bioinfo-biols

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CIRIquant

circular RNA quantification tools

CIRI-long

Circular RNA Identification for Nanopore Sequencing

SEVtras

sEV-containing droplet identification in scRNA-seq data (SEVtras)

Code_for_circSC

Analysis pipeline for our circSC manuscript

Flow2Spatial

Flow2Spatial reconstructs spatial proteomics through transfer learning.

CIRI-cookbook

Document for CIRI-series software

exoTras

exosome-containing droplet identification and source tracking in scRNA-seq data (exoTras)

FMT_Enterotype

Analysis code for FMT enterotype paper

PROFIT-seq

Programmable Full-length Transcriptome Sequencing

CIRI-full

Full length circRNA reconstruction and quantification using BSJ and reverse overlap (RO) features.

Zhaolab

RidgeSpace

Unravelling three-dimensionally dynamics of spatial multi-modal data

Jupyter Notebook