Bioinformatics Institute (@bioinf)
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Top repositories

1

Sibelia

Genome comparison via de Bruijn graph. To get the latest stable version, please visit our site.
C++
64
star
2

caller_benchmark

Companion repository for the human variant calling pipeline comparison paper
R
9
star
3

RMAhunter

HTML
7
star
4

SICER2

Our re-implementation of SICER broad peak calling algorithm
Python
4
star
5

CpG-Islander

CpG Islander
R
4
star
6

ukb_phewas

Phenome-wide search for pleiotropic loci
C++
3
star
7

russian_exome_pipeline

Description of tools and docker image for the Russian exome pipeline
Python
3
star
8

cellulases

C++
2
star
9

exome

A complete pipeline for cohort-oriented exome processing and annotation.
Shell
2
star
10

weswgs

R
2
star
11

afpaper

Scripts and data processing notes for Russian exome sequencing AF paper
R
1
star
12

bioalgo2012

Python
1
star
13

rnaseq

Shell
1
star
14

biss2014-snp

Python
1
star
15

dna_compression

Compression of DNA reads, single or paired
Python
1
star
16

pregnancy_meta_analysis

Jupyter Notebook
1
star
17

bayecho

mixing echo and bayeshammer together
C++
1
star
18

diabetes

Whole-exome study of obesity and diabetes in Russian population
R
1
star