Explore @bids-standard Open Source projects

Brain Imaging Data Structure (@bids-standard)

bids-standard

Stars
1,182
Global Org. Rank 13,747 (Top 5 %)
Registered about 6 years ago
Most used languages

Python
57.7 %

MATLAB
11.5 %

Shell
7.7 %

JavaScript
7.7 %

Mustache 3.8 %

TeX
3.8 %

HTML
3.8 %

Jupyter Notebook
3.8 %

bids-specification

Brain Imaging Data Structure (BIDS) Specification

bids-starter-kit

Collection of tutorials, wikis, and templates to get you started with creating BIDS compliant datasets

pybids

Python tools for querying and manipulating BIDS datasets.

bids-validator

Validator for the Brain Imaging Data Structure

bids-examples

A set of BIDS compatible datasets with empty raw data files that can be used for writing lightweight software tests.

bids-matlab

MATLAB / Octave tools for BIDS datasets

bids-website

Website for the Brain Imaging Data Structure standard. NEW WEBSITE PREVIEW: https://bids-website.readthedocs.io/en/latest/

pybv

A lightweight I/O utility for the BrainVision data format, written in Python.

bids2nda

A conversion tool for creating NDA compatible metadata representation from BIDS datasets.

pyedf

Python package to read from and write EEG data to European Data Format files.

bids-2-devel

Discussions and suggestions of backwards incompatible changes to BIDS

bep001

Project management repository (primarily issues) for BIDS Extension Proposal 001

openfmri2bids

Convert OpenfMRI dataset to BIDS.

awesome-bids

A curated list of awesome BIDS projects, proposals, apps and resources

bids-bep016

BEP016: diffusion derivatives

eye2bids

Convert eyetracking data to a BIDS compatible format (BEP20)

bep021

Organizing and coordinating the BIDS Extension Proposal 21: Common Electrophysiology Derivatives

Jupyter Notebook

BEP028_BIDSprov

Organizing and coordinating BIDS extension proposal 28 : BIDS Provenance

bids-stats-model-schema

bids-schema

Prospective repository to contain (including historical) versions of BIDS schema

bids2isatab

Extract ISA-Tab compatible metadata from Brain Imaging Data Structure compatible datasets

model-zoo

Zoo of BIDS Stats Models

maintenance-tools

Miscellaneous maintenance tools for the broader BIDS ecosystem.

stats-models

BIDS Stats Models Specification

bidsutils

Utility functions for working with BIDS compatible datasets

pybids-extension-template

A template repository for PyBIDS extensions

bids-methods

Repository for templates to generate methods section descriptions of BIDS datasets

pybids-reports

A subpackage of pyBIDS, implementing automatic report generation from BIDS datasets.

bids-extensions

BIDS Extension Proposal Docs

pybids-light

A prospective light-weight tool for querying BIDS datasets using the specification schema. May be integrated into pybids in the future.

bids-starter-kit-wiki

"Secret" repository to allow us to track contributions to the BIDS Starter Kit wiki