Mathematical and Computational Biology Research Group (@bcm-uga)
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bcm-uga

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  • Stars
    star
    157
  • Global Org. Rank 46,060 (Top 15 %)
  • Registered over 7 years ago
  • Most used languages
    R
         53.3 %
    HTML
         33.3 %
    C++
         6.7 %
    C
         6.7 %
  • Location ๐Ÿ‡ซ๐Ÿ‡ท France
  • Country Total Rank 4,330
  • Country Ranking
    R
         40
    HTML
         378
    C++
         643
    C
         1,298

Top repositories

1

Loter

A software package for local ancestry inference and haplotype phasing
C++
38
star
2

pcadapt

Performing highly efficient genome scans for local adaptation with R package pcadapt v4
R
37
star
3

TESS3_encho_sen

TESS3 is a fast and efficient program for estimating spatial population structure based on geographically constrained non-negative matrix factorization and population genetics.
R
18
star
4

SSMPG2017

Repository for the Data challenge about Software and Statistical Methods for Population Genetics (SSMPG 2017)
HTML
14
star
5

lfmm

Fitting latent factor mixed models
R
11
star
6

LEA

C
9
star
7

penda

PenDA is a rank-based method for personalized differential analysis.
R
7
star
8

SSMPG2022

Resources for Software and Statistical Methods for Population Genetics (SSMPG 2022)
HTML
6
star
9

geneticgap

Repository related to "A quantitative theory for genomic offset statistics"
HTML
4
star
10

NaturalGWAS

R package for the special issue "MER - Natural GWAS"
HTML
3
star
11

medepir

MEthylation DEconvoluation PIpeline in R
R
3
star
12

tfa

Factor analysis of ancient DNA samples
R
2
star
13

gedepir

Gene Expression DEconvolution PIpeline in R
HTML
1
star
14

apTreeshape

R
1
star
15

tuto-ssh

How to work on BCM servers (krakenator, luxor) from home?
1
star
16

LEA3_simulation_script

Scripts and data sets reproducing the results presented in (Gain & Franรงois, 2020)
R
1
star
17

IC-Finder

Segmentations of HiC maps into hierarchical interaction compartments
1
star