The Walter and Eliza Hall Institute of Medical Research (@bahlolab)
Guthub

bahlolab

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    126
  • Global Org. Rank 51,632 (Top 17 %)
  • Registered over 9 years ago
  • Most used languages
    R
         61.1 %
    Perl
         11.1 %
    HTML
         11.1 %
    C
         5.6 %
    C++
         5.6 %
    Groovy
         5.6 %
  • Location πŸ‡¦πŸ‡Ί Australia
  • Country Total Rank 2,856
  • Country Ranking
    Groovy
         37
    Perl
         88
    R
         110
    C
         480
    HTML
         735
    C++
         1,946

Top repositories

1

bioinfotools

Documenting usage and experience with bioinformatic tools
39
star
2

exSTRa

Expanded STR algorithm for Illumina sequencing data
R
22
star
3

superSTR

A lightweight, alignment-free utility for detecting repeat-containing reads in short-read WGS, WES and RNA-seq data.
C
16
star
4

Genes4Epilepsy

A curated list of monogenic epilepsy genes
HTML
6
star
5

pf_variant_calling_pipeline

A bpipe pipeline for processing WGS from Plasmodium facliparum
Groovy
6
star
6

isoRelate

Performs pairwise identity by descent analysis on haploid recombining organisms in the presence of multiclonal infections using SNP genotype data
R
6
star
7

Bio-STR-exSTRa

Prepare BAM/CRAM for exSTRa R package
Perl
5
star
8

moimix

R package for inferring multiple infections from high-throughput sequencing data
R
5
star
9

cluster_benchmark_data

3
star
10

RepeatExpansionDatabase

3
star
11

linkdatagen

Perl
3
star
12

brain_scRNAed

RNA editing in single brain cells
R
2
star
13

mitoCN

Estimate mitochondrial DNA copy number from whole genome sequencing data
R
2
star
14

ggwehi

Colour scales for ggplot2 based on the WEHI colour palette
R
2
star
15

XIBD

An R package to perform relatedness mapping between pairs of individuals from SNP data
C++
2
star
16

cavalier

cavalier: Candidate Variant List Evaluation Report
R
2
star
17

PlasmoSTR

R
1
star
18

PLASTER

Nextflow pipeline for long amplicon typing of PacBio SMRT sequencing data
R
1
star
19

ADAR-RADAR

Nextflow pipeline for detection, annotation and analysis of RNA editing
R
1
star
20

UKB.COVID19

UK Biobank COVID-19 data processing and risk factor association tests
HTML
1
star
21

AmpSeqR

Multi-locus Sequence Type Identificatino from Multiplexed Amplicon Deep Sequencing
R
1
star