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abacus-gene

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paml

PAML is a program package for model fitting and phylogenetic tree reconstruction using DNA and protein sequence data. Please report only **technical issues** on this repository (e.g., compiling, programs abort or do not run at all, etc.). Problems with input data and general questions should be posted at https://groups.google.com/g/pamlsoftware?pli

paml-tutorial

paml documentation and tutorials

hhsd

HHSD is a python pipeline for hierarchical heuristic species delimitation using genomic sequence data under the multispecies coalescent model. It drives data analysis using the program bpp.

bpp3

bpp-msci-D-process-mcmc

genotypecall