battenberg

Battenberg R package for subclonal copynumber estimation

dpclust

Dirichlet Process based methods for subclonal reconstruction of tumours

dpclust3p

Dirichlet Process Clustering Pre-Processing Pipeline

AmplificationTimeR

Code for timing amplifications

InUtero_MPN

Code accompanying 'In utero origin of myelofibrosis presenting in adult monozygotic twins' (Sousos, Ní Leathlobhair, et al., Nature Medicine, 2022). See https://www.nature.com/articles/s41591-022-01793-4