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Slicer

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Top repositories

1

Slicer

Multi-platform, free open source software for visualization and image computing.
C++
1,637
star
2

SlicerGitSVNArchive

⚠️ OBSOLETE | Multi-platform, free open source software for visualization and image computing.
C++
871
star
3

SlicerJupyter

Extension for 3D Slicer that allows the application to be used from Jupyter notebook
Python
238
star
4

SlicerNotebooks

Examples that illustrate how to use 3D Slicer via Jupyter notebooks in Python
Jupyter Notebook
71
star
5

ExtensionsIndex

Slicer extensions index
Python
65
star
6

SlicerDocker

Build, package, test, and run 3D Slicer and Slicer Extensions in Docker.
Dockerfile
55
star
7

SlicerExecutionModel

An open-source CMake-based project that provides macros and associated tools for the easy building of 3D Slicer command line interface (CLI) modules.
C++
32
star
8

vtkAddon

General-purpose features that may be integrated into VTK library in the future.
C++
14
star
9

SlicerOpenCV

Slicer Extension wrapping OpenCV
CMake
12
star
10

SlicerLanguagePacks

3D Slicer extension for creating, editing, and storing translations for Slicer core and extensions
Python
8
star
11

SlicerBuildEnvironment

A repository of scripts to set up a Slicer build environment.
Dockerfile
8
star
12

SlicerDeveloperToolsForExtensions

Set of tools to help developers when creating new Slicer extensions
Python
7
star
13

SkullStripper

Skull stripping for structural MR images of the brain, tested on T1 and T2 contrast.
C++
7
star
14

LandmarkRegistration

An interactive registration tool that manages viewing and manipulating of sets of fiducials
Python
6
star
15

Slicer-MeshContourSegmentation

⚠️ OBSOLETE | Slicer Command Line Module. Given some initial points in polydata will construct a contour and evolve it to high mean-curvature areas, returning the interior region indices.
C++
6
star
16

SlicerSurfaceToolbox

Supports various cleanup and optimization processes on surface models
C++
5
star
17

DashboardScripts

Collection of scripts used to configure/build/test/package 3D Slicer and associated extensions
CMake
4
star
18

github-circleci-trigger

A simple GitHub post-receive web hook handler able to trigger a CircleCI build.
Python
4
star
19

SlicerSOFA

3D Slicer extension to enable simulations using the SOFA framework
Python
4
star
20

Slicer-MultiResolutionAffineRegistration

⚠️ OBSOLETE | Legacy Slicer module - Provides affine registration using multiple resolution levels and decomposed affine transforms
C++
3
star
21

SlicerTestingData

Slicer Testing Data Mirror
Python
3
star
22

Slicer-BSplineDeformableRegistration

⚠️ OBSOLETE | Legacy Slicer module - Registers two images together using BSpline transform and mutual information
C++
3
star
23

ParameterSerializer

An open-source library for serialization and deserialization of Insight Segmentation and Registration Toolkit (ITK) classes.
C++
2
star
24

teem

Slicer fork of teem library - Official repository is hosted on SVN: https://svn.code.sf.net/p/teem/code/teem/trunk
C
2
star
25

SlicerProgrammingTutorial

Introduction to Python scripting and module development for 3D Slicer
2
star
26

SlicerNeuro

Extension for 3D Slicer than installs tools commonly needed for neuroimaging.
C++
2
star
27

Slicer-AffineRegistration

⚠️ OBSOLETE | Legacy Slicer module - Registers two images together using an affine transform and mutual information.
C++
2
star
28

sliceri18n

Python package that contains tools for internationalization of applications that use Python and Qt
Python
2
star
29

slicer.kitware.com-midas3-archive

This project is a snapshot of the data historically served from slicer.kitware.com/midas3
2
star
30

preview.apidocs.slicer.org

This project hosts and serves a preview version of Slicer API documentation
Shell
1
star
31

CurveMaker

Simple 3D Slicer module to generate a spline curve from a list of fiducials
Python
1
star
32

Slicer-RigidRegistration

⚠️ OBSOLETE | Legacy Slicer module - Registers two images together using a rigid transform and mutual information
C++
1
star
33

qMidasAPI

DISCONTINUED - Use http://github.com/commontk/qRestAPI
C++
1
star
34

Slicer-i18n

Repository to track tasks and store resources related to internationalization (i18n) of 3D Slicer.
1
star
35

leapmotion-python-distributions

CMake project for building LeapMotion Python 3 modules
CMake
1
star
36

Slicer-RobustStatisticsSegmenter

⚠️ OBSOLETE | Editor extension for using the 'RobustStatSegmenter' CLI module.
Python
1
star
37

SlicerBinaryDependencies

Binary dependencies required to build Slicer
1
star
38

apidocs.slicer.org

This project hosts and serves the Slicer API documentation
Shell
1
star
39

jqplot

⚠️ OBSOLETE | Fork of jqplot from https://bitbucket.org/cleonello/jqplot to support patches for Slicer4
JavaScript
1
star
40

SlicerRegistrationLibrary

Library of registration cases including step-by-step instructions and discussions
1
star
41

Attic

⚠️ OBSOLETE | This is where abandoned classes and deprecated code related to Slicer may be archived
C++
1
star
42

SlicerDataStore

This project organizes Slicer sample data, atlases and registration case library images.
Python
1
star
43

SlicerLanguageTranslations

Repository to store source and localized language translation files for 3D Slicer and its extensions
1
star
44

Slicer-OpenSSL

OpenSSL sources and builds used in Slicer-based projects.
CMake
1
star
45

OpenIGTLinkIF

DISCONTINUED - See https://github.com/openigtlink/OpenIGTLinkIF - OpenIGTLink IF module manages communications between 3D Slicer and other OpenIGTLink-compliant software through the network.
C++
1
star
46

Slicer-OtsuThresholdImageFilter

Legacy Slicer module - This filter creates a binary thresholded image that separates an image into foreground and background components
C++
1
star