Explore @Sentieon Open Source projects

@Sentieon

Sentieon

Stars
157
Global Org. Rank 46,002 (Top 15 %)
Registered over 6 years ago
Most used languages

Shell
35.7 %

Python
28.6 %

WDL 14.3 %

Common Workflow Language 7.1 %

Dockerfile
7.1 %

HCL 7.1 %
Location 🇺🇸 United States
Country Total Rank 39,083
Country Ranking

WDL 7

Common Workflow Language 19

Dockerfile
1,114

Shell
1,703

HCL 2,437

sentieon-scripts

Helper scripts for biological data processing from Sentieon

sentieon-dnaseq

Sentieon DNAseq

hap-eval

A VCF comparison engine for structual variant benchmarking

sentieon-dnascope-ml

Sentieon DNAscope + Machine Learning Model

sentieon-docker

Example Dockerfiles for use with the Sentieon software

sentieon-models

Model files for Sentieon variant callers

Sentieon-WDL

WDL pipelines for the Sentieon tools

sentieon-matching-performance

Accuracy and runtime benchmarks for the Sentieon GATK-matching tools

sentieon-google-genomics

Run Sentieon pipelines on Google Cloud Platform

sentieon-amazon-omics

Sentieon pipelines for Amazon Omics

vcflib

An open-source Python library for parsing and manipulation of VCF

Sentieon-cwl

CWL pipelines for the Sentieon tools

Common Workflow Language

aws-benchmark-scripts

Scripts used in benchmarking Sentieon DNAseq and DNAscope pipelines on AWS EC2

terraform

Terraform configuration files for the Sentieon software

sentieon-cli

A command-line interface for Sentieon pipelines