Pombert Lab (@PombertLab)
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PombertLab

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  • Stars
    star
    29
  • Global Org. Rank 100,644 (Top 33 %)
  • Registered over 10 years ago
  • Most used languages
    Perl
         100.0 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 94,186
  • Country Ranking
    Perl
         503

Top repositories

1

3DFI

The 3DFI pipeline predicts the 3D structure of proteins and searches for structural homology in the 3D space.
Perl
16
star
2

SSRG

The SSRG pipeline was created as a simple and focused tool to investigate genetic diversity between genomes.
Perl
3
star
3

A2GB

A2GB is a pipeline that will transform the genome annotation files exported from Apollo in preparation for sequence submission to NCBI’s GenBank.
Perl
3
star
4

Publication_scripts

This repository contains scripts from published or submitted manuscripts.
Perl
3
star
5

Old

Contains old miscellaneous scripts for genomics. No longer maintained.
Perl
1
star
6

SYNY

The SYNY pipeline investigates synteny between species by reconstructing protein clusters from gene pairs.
Perl
1
star
7

ID16S

This pipeline reconstructs the composition of species from 16S amplicon sequencing datasets.
Perl
1
star
8

QueGO

The QueGO pipeline identifies potential homologs to proteins related to specific functionality.
Perl
1
star
9

A2A

The A2A pipeline guides users from genome assembly to annotations.
Python
1
star