Metabolic Engineering Group at CBMA (@MetabolicEngineeringGroupCBMA)
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pydna-examples

Jupyter notebooks and data files that demonstrates how pydna can be used to simulate and document cloning.
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2

old_site

This is our group website https://metabolicengineeringgroupcbma.github.io/
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seguid

SEGUID v2: Checksums Circular, Linear, Single- and Double-Stranded Sequences
Python
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pydna_template

This is a template repository for a pydna documentation and simulation project.
Jupyter Notebook
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ypk-xylose-pathways

Pereira, F., Azevedo, F., Parachin, N. S., Hahn-Hรคgerdal, B., Gorwa-Grauslund, M. F., & Johansson, B. (2016). Yeast Pathway Kit: A Method for Metabolic Pathway Assembly with Automatically Simulated Executable Documentation. ACS Synthetic Biology, 5(5), 386โ€“394.
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Cunha_et_al_2017

Costa, C. E., Romanรญ, A., Cunha, J. T., Johansson, B., & Domingues, L. (2017). Integrated approach for selecting efficient Saccharomyces cerevisiae for industrial lignocellulosic fermentations: Importance of yeast chassis linked to process conditions. Bioresource Technology, 227, 24โ€“34.
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