Explore @ManchesterBioinference Open Source projects

Manchester Bioinference Group (@ManchesterBioinference)

ManchesterBioinference

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Location 🇬🇧 United Kingdom
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Scasat

Scasat is a single cell ATAC-seq preprocessing and analysis pipeline

Jupyter Notebook

BranchedGP

Branching Gaussian process

Jupyter Notebook

IntegratingATAC-RNA-HiC

scripts for the integrating ATAC-seq, RNA-seq and CHi-C paper

Jupyter Notebook

GPcounts

Gaussian process regression package for counts data with negative binomial and zero-inflated negative binomial likelihoods

Jupyter Notebook

GrandPrix

Jupyter Notebook

DEtime

R package for two-sample time series analysis using Gaussian process methods

burstInfer

Using a dynamic memory-adjusted Hidden Markov Model to infer global and single-cell transcriptional parameters

EP_Bayes

Bayesian inference of enhancer-promoter links

GPosc

Jupyter Notebook

GP_Transcription_Dynamics

cjBitSeq_benchmarking

benchmarking experiments for cjBitSeq