@MG-RAST
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MG-RAST

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  • Stars
    star
    312
  • Global Org. Rank 31,269 (Top 10 %)
  • Registered almost 13 years ago
  • Most used languages
    Python
         25.0 %
    Perl
         17.9 %
    Go
         17.9 %
    Common Workflow Language     10.7 %
    JavaScript
         10.7 %
    Shell
         7.1 %
    TeX
         3.6 %
    R
         3.6 %
    HTML
         3.6 %
  • Location πŸ‡ΊπŸ‡Έ United States
  • Country Total Rank 20,902
  • Country Ranking
    Common Workflow Language     5
    Perl
         302
    R
         1,355
    Go
         1,951
    TeX
         3,557

Top repositories

1

AWE

workflow and resource management system for bioinformatics data analysis
Go
69
star
2

Shock

An object store for scientific data
Go
51
star
3

MG-RAST

The MG-RAST Backend -- the API server
Perl
44
star
4

MG-RAST-Tools

Repository of script tools, examples, and contributed code for using the MG-RAST API
Python
26
star
5

matR

Metagenomics Analysis Tools
R
24
star
6

pipeline

The MG-RAST pipeline
Common Workflow Language
24
star
7

kmerspectrumanalyzer

Python
11
star
8

DRISEE

duplicate read inferred sequencing error estimator
Python
9
star
9

MG-RASTv4

The MG-RAST frontend -- the JavaScript web site
HTML
8
star
10

M5nr

5
star
11

Skyport2

framework for large scale data management and reproducible multi-cloud workflow execution
Perl
5
star
12

MG-RAST-infrastructure

CoreOS/Fleet Infrastructure for MG-RAST
Shell
3
star
13

app-definitions-deprecated

dockerfiles, app-definitions and scripts to upload images to Shock
Perl
3
star
14

myM5NR

M5NRv2 -- non-redundant protein and rRNA database integration
Perl
3
star
15

Retina

JavaScript library used in MG-RAST and skycore
JavaScript
3
star
16

go-shock-client

go client library for Shock
Go
2
star
17

mtfTools

prototype tool for working with GSC metagenome transport format
Python
2
star
18

golib

Go
2
star
19

ipy-mkmq

IPython Tools for analysis in MG-RAST KBase MatR QIIME
Python
2
star
20

ShockNodejs

JavaScript
2
star
21

mtf

MG-RAST metagenomes in MTF format (prototype)
2
star
22

metazen

JavaScript
2
star
23

tech-report

MG-RAST manual and documentation
TeX
2
star
24

CWL-Tools

CWL Tool repository
Common Workflow Language
1
star
25

python-shock-client

command line client for Shock
Python
1
star
26

mobedac

site repo
1
star
27

amplicon

Common Workflow Language
1
star
28

anl-seq-service

Shell
1
star
29

dockbuild

Tool to build docker images defined in yaml file
Go
1
star
30

ebi-submitter

Tools for submitting public MG-RAST jobs to the EBI's ENA archive
Perl
1
star
31

autoskewer

Repository for wrapper scripts for adapter trimming of high throughput sequence data, mostly illumina.
Python
1
star