@LANL-Bioinformatics
Guthub

LANL-Bioinformatics

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  • Stars
    star
    195
  • Global Org. Rank 40,946 (Top 14 %)
  • Registered about 11 years ago
  • Most used languages
    Perl
         33.3 %
    Python
         22.2 %
    Jupyter Notebook
         22.2 %
    C++
         22.2 %

Top repositories

1

EDGE

EDGE is a highly adaptable bioinformatics platform that allows laboratories to quickly analyze and interpret genomic sequence data.
Perl
73
star
2

MeGAMerge

MeGAMerge (A tool to merge assembled contigs, long reads from metagenomic sequencing runs)
Perl
14
star
3

ADEPT

ADEPT is the only tool to date that dynamically assesses errors within reads by comparing position-specific and neighboring base quality scores with the distribution for the dataset being analyzed.
Perl
7
star
4

PanGIA

Python
7
star
5

KWAGE

Ultra-fast, Bloom filter-based sequence search
C++
6
star
6

PCRamp

Software for designing multiplex-compatible, PCR-based enrichment assays
C++
5
star
7

assay_validation

This is a web-app and workflow for computationally screening PCR-based assays
Python
4
star
8

normalCowboy

Jupyter Notebook
2
star
9

synthetic_transkingdom_data

Jupyter Notebook
1
star