Cascade

Calibrated inference of spiking from calcium ΔF/F data using deep networks

Centripetal_propagation_astrocytes

Custom code (Python or Matlab) to compute centripetal propagation from astrocytic calcium recordings using pixel-wise correlation functions

OCIA

Calcium Imaging Analysis pipeline with a flexible framework

CaImAn_DendriteAnalysis

Jupyter notebooks for analysis of dendritic two-photon calcium imaging data using the CaImAn toolbox.

CaImAn_LocomotionAnalysis

Jupyter notebooks for analysis of Pia's two-photon calcium imaging data using the the CaImAn toolbox.