Digital Health & Machine Learning (@HealthML)
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HealthML

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Top repositories

1

self-supervised-3d-tasks

Python
186
star
2

ContIG

This is the official implementation of the method ContIG, for self-supervised learning from medical imaging with genomics
Python
50
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3

active-segmentation

ActiveSegmentation: A Simulation Framework for Benchmarking Active Learning Strategies for 3D Medical Image Segmentation
Python
16
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4

Deep-Learning-Lecture

HPI Deep Learning Lecture
12
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5

ukb-200k-wes-vep

UK Biobank 200k whole exome sequencing variant effect predictions
6
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6

explainability-requires-interactivity

Code to reproduce experiments in the paper "Explainability Requires Interactivity". See https://github.com/HealthML/StyleGAN2-Hypotheses-Explorer/ for the implementation of the interactive framework.
Python
5
star
7

Math4ML-Lecture

HPI Mathematics for Machine Learning Lecture
4
star
8

StyleGAN2-Hypotheses-Explorer

Implementation of the interactive framework from the paper "Explainability Requires Interactivity". See https://github.com/HealthML/explainability-requires-interactivity for the code to reproduce experiments from the paper.
Python
4
star
9

seak

Python
2
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10

AntiSplodge

Spatial Transcriptomics deconvolution pipeline
Jupyter Notebook
2
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11

vseg

Jupyter Notebook
1
star
12

lucid-torch

Jupyter Notebook
1
star
13

faatpipe

Functional Annotation and Association Testing Pipeline
Python
1
star