GΓΆke Lab (@GoekeLab)
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GoekeLab

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  • Stars
    star
    979
  • Global Org. Rank 15,217 (Top 5 %)
  • Registered over 5 years ago
  • Most used languages
    Python
         37.5 %
    R
         37.5 %
    Jupyter Notebook
         12.5 %
    Nextflow     12.5 %
  • Location πŸ‡ΈπŸ‡¬ Singapore
  • Country Total Rank 255
  • Country Ranking
    Nextflow     3
    R
         3
    Jupyter Notebook
         72
    Python
         103

Top repositories

1

bioinformatics-workflows

minimal example implementations for bioinformatics workflow managers
Python
242
star
2

awesome-nanopore

A curated list of awesome nanopore analysis tools.
207
star
3

bambu

Reference-guided transcript discovery and quantification for long read RNA-Seq data
R
163
star
4

xpore

Identification of differential RNA modifications from nanopore direct RNA sequencing
Python
127
star
5

m6anet

Detection of m6A from direct RNA-Seq data
Python
95
star
6

sg-nex-data

Nanopore RNA-Seq data from the Singapore Nanopore-Expression Project
Jupyter Notebook
88
star
7

proActiv

Estimation of Promoter Activity from RNA-Seq data
R
44
star
8

NanoporeRNASeq

Nanopore RNASeq data
R
8
star
9

ICGC_alternative_promoters

A pipeline for alternative promoter analysis.
Nextflow
1
star