Explore @Gardner-BinfLab Open Source projects

University of Otago, Gardner BinfLab (@Gardner-BinfLab)

Gardner-BinfLab

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70
Global Org. Rank 68,303 (Top 22 %)
Registered almost 12 years ago
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Python
20.0 %

R
20.0 %

Perl
13.3 %

TeX
13.3 %

Jupyter Notebook
13.3 %

CSS
6.7 %

Gnuplot 6.7 %

JavaScript
6.7 %
Location 🇳🇿 New Zealand
Country Total Rank 923
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Gnuplot 2

TeX
9

Perl
27

Jupyter Notebook
72

R
82

CSS
250

JavaScript
389

Python
449

TISIGNER-ReactJS

TISIGNER: Unleash the power of synthetic biology

deltaBS

Quantifying the significance of genetic variation using probabilistic profile-based methods.

RNA_Interactions_Benchmark

RNA-RNA interaction predictions tools benchmark scripts, wrappers and datafiles.

invasive_salmonella

Data and code to accompany our paper on identifying patterns of gene degradation associated with invasiveness in Salmonella

SoDoPE_paper_2020

Jupyter Notebook

speed-vs-accuracy-meta-analysis

scripts and datasets associated with a study of benchmarks of bioinformatic software

Razor

Tool to predict eukaryotic signal peptides. In addition, prediction of toxin and fungi signal peptides is also done.

TIsigner

Translation Initiation coding region designer

invasive_campylobacter

Data and code to accompany our work on invasive Campylobacter isolates

Avoidance

RNA avoidance scripts and data.

ncVarDB

Repo for the ncVAR database

PPI_Analysis_2022

An accurate, scalable and generalisable tool for predicting protein-protein interactions

AREBA

A RNA Encyclopaedia for Bacteria and Archaea

TIsigner_paper_2019

Code related to TIsigner manuscript and webserver

Jupyter Notebook

Compartmentalisation_Marsden2019