Troyanskaya Laboratory (@FunctionLab)
Guthub

FunctionLab

Twitter logo Share LinkedIn logo Share Facebook logo Share

Top repositories

1

selene

a framework for training sequence-level deep learning networks
Jupyter Notebook
371
star
2

ExPecto

predicting expression effects of human genome variants ab initio from sequence
Python
117
star
3

sei-framework

code to run sei and obtain sei and sequence class predictions
Python
89
star
4

sei-manuscript

Code for reproducing the Sei manuscript results
Jupyter Notebook
15
star
5

DeepArk

Modeling the genomic regulatory codes of fly, mouse, worm, and fish with deep learning
Python
14
star
6

tapioca

a framework for predicting global protein-protein interaction networks from dynamic mass spec data
Python
12
star
7

giant-api

RESTful API for Functional Genomics
Python
7
star
8

function

Python library for functional genomics
Python
4
star
9

onboarding

Information for new Troyanskaya lab members
4
star
10

sleipnir

C++
3
star
11

diseasequest-docker

C++
3
star
12

giant-api-biojs

BioJS connector for GIANT
CSS
2
star
13

find_scripts

Code for training ontology-based CRF model for tissue-developmental stage-specific gene prediction
HTML
1
star
14

HeartENN-models

Documentation and scripts to run HeartENN (Richter et al., 2020)
Python
1
star
15

flib

Python
1
star