mutatex
scripts and facilities for in-silico mutagenesis with FoldXRosettaDDGPrediction
PDBminer
scripts to find PBD structures for cancer driver proteinsCAncer-bioMarker-Prediction-Pipeline-CAMPP
The Cancer bioMarker Prediction Pipeline (CAMPP)MoonlightR
pyinteraph2
development repository for PyInteraph2TCGAbiolinks_examples
repository with the scripts to run examples of the publications with new functionalities of TCGAbiolinkspyinteraph
A software research tool for the analysis of structural communication in protein ensemblesMAVISp
the MAVISp database for structural variants annotationLUAD_LUSC_TCGA_comparison
Scripts and Data associated with our publication on genomic signatures to discriminate LUAD and LUSC lung cancer types using TCGA datapsntools
LipidDyn
repository associated to our pipeline for lipid dynamicsxpyder
xPyder PyMOL PluginMoonlight2R
MoonlightR 2.0 development repositorycancermuts
Software for the automatic annotation of cancer mutationsMAL_MD
repository associated to our study on conformational gating in ammonia lyaseMol-Analysis
environments_workshop
Proteomics-TIF
Bioinformatic Analysis of Proteomics Data From Breast Tumour Intersitital Fluid.N-glycan-TIF
Scripts and Data associated to our publication on analyses of glycan profiling of breast cancer interstitial fluidslc3b_cancer_paper
repository with data from our publication on lc3b dynamics and mutationsTARGET_NBL
repository for analyses of the TARGET-NBL datasetSNO_investigation_pipelines
TRAP1_activity
miRNA-mRNA_TIF
repository for our publication on miRNA and mRNA of breast cancerAngle_histograms
MD-wrapper
Pipeline for MD simulationYEAST_MEMBRANE_MD
Repository for the simulation data and analyses of our publication in collaboration with Chalmer's University on yeast membranesPyInKnife2
New version of the PyInKnife toolbcl_bh3only_breast_cancer
repository for publication on bh3-only and bcl proteins in breast cancerULK1_mutations
repository associated to our publication on ULK1 mutations and alterations in cancerBCLxL-allo
repository associated to our publication on long-range communication in BCLxLMoonlight2_case_studies
PCM1_LIR
repository for the data and scripts on our publication on PCM1 LIRPyInKnife
metaD_-GPR40-FFAR1
repository for metadynamics inputs of GPR40/FFAR1Love Open Source and this site? Check out how you can help us