Davis Laboratory (@DavisLaboratory)
Guthub

DavisLaboratory

Twitter logo Share LinkedIn logo Share Facebook logo Share
  • Stars
    star
    88
  • Global Org. Rank 61,428 (Top 20 %)
  • Registered over 8 years ago
  • Most used languages
    R
         66.7 %
    Python
         22.2 %
    HTML
         5.6 %
    Dockerfile
         5.6 %
  • Location πŸ‡¦πŸ‡Ί Australia
  • Country Total Rank 3,594
  • Country Ranking
    R
         76
    Dockerfile
         174
    HTML
         711
    Python
         2,741

Top repositories

1

singscore

An R/Bioconductor package that implements a single-sample molecular phenotyping approach
R
40
star
2

vissE

An R/Bioconductor package to identify higher-order molecular phenotypes
R
10
star
3

NK_scoring

HTML
8
star
4

msImpute

Methods for label-free mass spectrometry proteomics
R
7
star
5

dcanr

Differential co-expression/association network analysis
R
6
star
6

scDECAF

Reference-free celltype and phenotype annotation in single cell RNAseq by learning geneset representations
R
3
star
7

PySingscore

Python
3
star
8

standR

Spatial transcriptomics analyses and decoding in R
R
3
star
9

GenesetAnalysisWorkflow

Dockerfile
3
star
10

Combinatorial_miRNAs

A collection of scripts associated with the manuscript Cursons et al (2017) - Post-transcriptional control of EMT is coordinated through distributed, combinatorial targeting by multiple microRNAs
Python
2
star
11

emtdata

R
2
star
12

peptide-protonet

Embedding MS1 peptide features and identification transfer
1
star
13

mastR

An R package for automatically screening cell type signature in specific tissue/organ/cancer.
R
1
star
14

SimulatorGRN

R
1
star
15

oppar

Outlier Profile and Pathway Analysis in R
R
1
star
16

SingscoreAMLMutations

R
1
star
17

Db_Compare

Compares the databases Reactome, KEGG, HPRD, WikiPathways and PhosphoSitePlus on their coverage of phospho/proteomic data.
Python
1
star
18

Jacquelot_2021_reproducibility

Source code and application note for ILC2 classifier developed in Jacquelot et al., 2021
R
1
star
19

prosperiti

Protein network significance permutation testing
Python
1
star