Explore @CovertLab Open Source projects

Covert Lab (@CovertLab)

CovertLab

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Global Org. Rank 32,592 (Top 11 %)
Registered about 12 years ago
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61.5 %

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Location 🇺🇸 United States
Country Total Rank 22,847
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MATLAB
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ActionScript 1,090

Python
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WholeCell

Mycoplasma genitalium whole-cell model

WholeCellEcoliRelease

Release of the whole cell E. coli model.

DeepCell

wcEcoli

Whole Cell Model of E. coli

vEcoli

Whole cell model of E. coli implemented with Vivarium

Jupyter Notebook

WholeCellViz

Data visualization for whole-cell models

WholeCellSimDB

WholeCellDB is a hybrid SQL/HDF database for storing and retrieving whole-cell model predictions.

WholeCellKB

WholeCellKB is a collection of free, open-source model organism databases designed specifically to enable comprehensive, dynamic simulations of entire cells and organisms.

borealis

Run FireWorks workflows in Google Cloud.

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Stochastic simulations in python

covertrack

Jupyter Notebook

parest

Workflow for E. coli glycolysis ODE model parameter estimation.

NetworkPainter

Web-based software program creating and animating signaling network diagrams