@CanDIG
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CanDIG

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Top repositories

1

CanDIGv2

The CanDIG v2 platform
Smarty
15
star
2

images_bakeoff

Test bundling of bwa, picard, and samtools in various image/container formats
Shell
4
star
3

federated-learning

For the development of differentially private federated machine learning on the CanDIG data services
Jupyter Notebook
3
star
4

candig-server

The CanDIG V1 core application enabling data discovery and visualization for clinical & genomic data.
Python
3
star
5

python_model_service

Example CanDIG service following best practices in python. API viewable at:
Python
3
star
6

tyk-kc-demo

A toy demo showing how to use Tyk to protect an API, denying access to it without an OIDC token from a Keycloak instance, and enforcing rate limiting
Shell
3
star
7

candig_cnv_service

Python
2
star
8

federated_1kg

Repository for the federated thousand genomes analysis project
Jupyter Notebook
2
star
9

htsget_app

Htsget API implementation based on the Htsget protocol
Python
2
star
10

candigv2_opa

Open Policy Agent
2
star
11

McFly

Go Layer for data
Go
2
star
12

candig.github.io

Website for the CanDIG project
JavaScript
2
star
13

candig-opa

Developing relevant rego policies for OPA CanDIGv2
Python
2
star
14

presto-graphql-testbed

Testbed for playing with presto and graphql on top of FHIR and variant databases
JavaScript
1
star
15

infrastructure

DevOps and other infrastructure notes and tools
Python
1
star
16

tyk_api_setup

Python
1
star
17

mesi-search

Python
1
star
18

candig_authz_service

CanDIG Authorization Service.
Python
1
star
19

rnaget_service

Implementation of GA4GH rnaget API
Python
1
star
20

candig-server-external-dashboard

A React.js-based dashboard enabling data visualization for candig-server APIs.
JavaScript
1
star
21

candig-data-portal

A data analytics and visualization portal for V2 CanDIG services.
JavaScript
1
star
22

candig-schemas

Data models and API definitions
Python
1
star
23

candigv2-ingest

Ingest microservice for CanDIGv2
Python
1
star
24

candig_compose

deploy the candig stack with compose
Smarty
1
star
25

tyk-keycloak-starter-kit

A Tyk+Keycloak-based solution for secure full-stack web application deployment.
JavaScript
1
star
26

GraphQL-interface

Python
1
star