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@CaiGroup

CaiGroup

Stars
74
Global Org. Rank 66,506 (Top 22 %)
Registered over 7 years ago
Most used languages

MATLAB
60.0 %

Python
20.0 %

Julia
10.0 %

Jupyter Notebook
10.0 %

seqFISH-PLUS

dna-seqfish-plus

dna seqfish image analysis code

Intron-SeqFISH

used for intron seqFISH

RNA-SPOTs

Scripts for image processing used in RNA SPOTs

dna-seqfish-plus-tissue

DNA seqFISH+ tissue analysis code and probe sequences

dna-seqfish-plus-multi-omics

Spatial multi-omics analysis code and additional resources

Jupyter Notebook

pyfish_tools

This repository contains various algorithms for analyzing image-based datasets, with a primary focus towards fluorescent in situ hybridization data.

neuralcrest

DNASeqFISHChromosomeAssignment.jl

datapipeline-public