@CINPLA

Top repositories

1

exdir

Directory structure standard for experimental pipelines.
Python
72
star
2

spatial-maps

Analysis for spatially modulated spiking activity, e.g. place cells, grid cells
Python
15
star
3

RippleNet

Jupyter Notebook
11
star
4

tracking-plugin

Open Ephys plugins for tracking experiments
C++
10
star
5

expipe

Experiment-data management platform
Python
8
star
6

NeuroCNN

AGS Script
7
star
7

pyopenephys

Python reader for open ephys
Python
6
star
8

Library

Overview of books for our library
4
star
9

exana-legacy

Deprecated see requirements in cinpla-base
Python
3
star
10

KNPsim

Simulator for ion concentrations using the electroneutral "Kirchoff-Nernst-Planck" (KNP) formalism in FEniCS
Jupyter Notebook
3
star
11

EDPRmodel

An electrodiffusive, ion conserving Pinsky-Rinzel model with homeostatic mechanisms
Python
3
star
12

biophysical_thalamocortical_system

Biophysical network modeling of the dLGN circuit: Effects of cortical feedback on spatial response properties of relay cells
AGS Script
3
star
13

PRmodel

An implementation of the Pinsky-Rinzel model in Python
Python
2
star
14

elegant-exdir

Simple, elegant C++ library for reading exdir files
C++
2
star
15

MultiLinearPopulationAnalysis-MLPA

Example code for Multi-Linear Population Analysis (MLPA), Geddes et al.
MATLAB
2
star
16

pyxona

Python library for reading Axona files
Python
2
star
17

cinpla-base

Repository to fork when you want to start a new project
2
star
18

spike-waveform

Analysis of spike waveforms
Python
2
star
19

expipe-cinpla-legacy

All that was expipe and more
Python
2
star
20

EDPRmodel_analysis

Python
2
star
21

spike-statistics

Analysis of spiking stats e.g. correlogram etc
Python
2
star
22

phase-precession

Measures for phase precession
Python
2
star
23

data-management-workshop-NRSN-DLN-2019

Resources for the workshop
Jupyter Notebook
2
star
24

elegant-npy

Simple, elegant C++ library for reading NumPy files
C++
1
star
25

exdir-browser

C++
1
star
26

hdf5-exdir-converter

A simple hdf5-exdir converter
Python
1
star
27

Skaar_et_al_2020_PLoS_Comput_Biol

Python
1
star
28

time-frequency

Time frequency analysis of neurodata
Python
1
star
29

expipe-plugin-cinpla

Plugins for expipe command line interface
Python
1
star
30

oscpack

Automatically exported from code.google.com/p/oscpack
C++
1
star
31

place-stimulation

Analysis for the place cell electrical stimulation project
Jupyter Notebook
1
star
32

visual-stimulation

Analysis of visual stimulation e.g. drifting gratings and stuff
Python
1
star
33

spikedynamics

Collection of cross-correlation functions. Work in progress.
Python
1
star
34

expipe-browser

Experiment browser for the analysis pipeline
QML
1
star
35

SummerSchool2015

Jupyter Notebook
1
star