www.neuroAI-HD.org (@CCI-Bonn)
Guthub

CCI-Bonn

Twitter logo Share LinkedIn logo Share Facebook logo Share

Top repositories

1

HD-BET

Automated deep-learning based brain extraction applicable to a broad range of MRI sequence types and with robust performance even in the presence of pathology or treatment-induced tissue alterations.
Python
31
star
2

HD-GLIO

Automated deep-learning based brain tumor segmentation on MRI
Python
26
star
3

HD-GLIO-AUTO

Automated processing of MRI in neuro-oncology (combining HD-BET, image co-registration, and HD-GLIO in one container)
Python
24
star
4

HD-SEQ-ID

HD-SEQ-ID: HD Sequence Identifier for brain MRI
Shell
12
star
5

HD-MS-Lesions

Automated deep learning based segmentation of multiple sclerosis lesions on MRI
Python
9
star
6

HD-GLIO-XNAT

Automated processing tool for MRI in neuro-oncology (brain tumor segmentation, volumetric tumor response assessment) provided as Container Service Plugin for XNAT, enabling integration in existing radiological infrastructures.
Python
9
star
7

HD-BM

Automated deep-learning based segmentation of brain metastases on MRI
Python
7
star
8

dCNN-MRI-Reconstruction

Code for MR Image reconstruction using physics-based neural network
Jupyter Notebook
5
star