Explore @BrendelGroup Open Source projects

Brendel Group (@BrendelGroup)

BrendelGroup

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Global Org. Rank 66,963 (Top 22 %)
Registered over 11 years ago
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Shell
28.6 %

Python
14.3 %

C
14.3 %

R
14.3 %

Perl
14.3 %

Makefile 7.1 %

C++
7.1 %
Location 🇺🇸 United States
Country Total Rank 53,362
Country Ranking

Perl
1,005

Makefile 1,018

C
5,010

R
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C++
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AEGeAn

Integrated toolkit for analysis and evaluation of annotated genomes

SRAssembler

Selective and Recursive local Assembler

pdom-genome-project

Polistes dominula genome project, a collaboration between the Insect Sociogenomics Lab at Iowa State University and the Computational Genome Science Lab at Indiana University

MoVRs

Motif set Reduction and Validation (MoVRs) - a workflow for the derivation of genome-wide DNA motif detection and vetting

GoSTRIPES

Computational workflows for STRIPE-seq data analyses

TRegGA

Targeted reference-guided genome assembly for comparative rice genomics

bghandbook

Handbook for Brendel Group students, postdocs, and staff

FMAB

Fundamental Models and Algorithms in Bioinformatics

BWASP

Bisulfite-seq data Workflow Automation Software and Protocols

GeneSeqer

Sensitive spliced-alignment of cDNAs or proteins

GoRAMPAGE

GoRAMPAGE - a workflow for promoter detection by 5'-read mapping

BWASPR

R functions and scripts to process output from the BWASP workflow

code4Rice3K

code developed for the analysis of the Rice 3000 Genomes project data

HymHub

HymHub is now GenHub

bgSingularityHub

A portal to our collection of Singularity/Apptainer definition and image files

TSRchitect

Promoter identification from diverse types of large-scale TSS profiling data