Alkan Lab for Bioinformatics and Computational Genomics (@BilkentCompGen)
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BilkentCompGen

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  • Stars
    star
    111
  • Global Org. Rank 55,127 (Top 18 %)
  • Registered about 10 years ago
  • Most used languages
    C
         50.0 %
    C++
         16.7 %
    SCSS     8.3 %
    Python
         8.3 %
    VHDL     8.3 %
    MATLAB
         8.3 %
  • Location πŸ‡ΉπŸ‡· Turkey
  • Country Total Rank 1,142
  • Country Ranking
    VHDL     3
    C
         36
    MATLAB
         124
    SCSS     124
    C++
         131
    Python
         4,248

Top repositories

1

tardis

Toolkit for automated and rapid discovery of structural variants
C
20
star
2

mrfast

micro-read Fast Alignment Search Tool
C
20
star
3

hercules

Profile HMM-based hybrid error correction algorithm for long reads
C++
20
star
4

valor

variation discovery using long range information in linked-reads
C
16
star
5

GateKeeper

GateKeeper: Fast Alignment Filter for DNA Short Read Mapping
VHDL
15
star
6

mrcanavar

micro-read Copy Number Variant Regions finder
C
9
star
7

MAGNET

MAGNET: Understanding and Improving the Accuracy of Genome Pre-Alignment Filtering
MATLAB
4
star
8

BilkentCompGen.github.io

Alkan Lab website
SCSS
3
star
9

GateKeeper-GPU

Pre-Alignment Filtering for Short Read Mapping in GPU
C
2
star
10

tr-covid

1
star
11

brifin

Python
1
star
12

repeatnet

RepeatNet: an ab initio centromeric sequence detection algorithm
C
1
star
13

saber

Pattern matching tool to detect block rearrangement events in genomic sequences
C++
1
star