Department of Bioinformatics - BiGCaT (@BiGCAT-UM)
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BiGCAT-UM

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Top repositories

1

pils

Programming In the Life Sciences
HTML
11
star
2

PathSBML

A PathVisio plugin to import SBML models as SBGN-PD diagrams.
Java
4
star
3

raredisease-omim

Groovy
3
star
4

bridgedb-r

R package for BridgeDb
R
2
star
5

chem-rdf-model-review

Repository to support a review article about RDF models for chemical entities
2
star
6

website-monitoring

Script and configuration for website monitoring
Shell
1
star
7

EnsemblOpenAPI

JavaScript
1
star
8

wp2lod

Code to convert WikiPathways to RDF.
HTML
1
star
9

Drug-Gene-Pathway-Network

Bachelor project of Bram van Steen
Java
1
star
10

org.pathvisio.io.bioschemas

Java
1
star
11

PRA3006-SPARQL

This ebook has information about life science databases, their SPARQL endpoints, what information they hold, what data models they use, and how to query those.
Groovy
1
star
12

BiGCaT-Teaching

Department of Bioinformatics - BiGCaT Teaching Materials
1
star
13

Transcriptomics_Metabolomics_tutorials

Semi-automated workrflow for functional analysis of transcriptomics and metabolomics data
HTML
1
star
14

BridgeDbConfig

Java
1
star
15

Transcriptomics_Metabolomics_Analysis

Automated workflow for Omics integration on IBDs data
Jupyter Notebook
1
star
16

literatureSummary

Wikidata SPARQL queries to summarize a corpus of literature
Makefile
1
star