hewm2008@bgi (@BGI-shenzhen)
Guthub

BGI-shenzhen

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  • Stars
    star
    675
  • Global Org. Rank 19,871 (Top 7 %)
  • Registered almost 10 years ago
  • Most used languages
    C++
         62.5 %
    Perl
         37.5 %
  • Location 🇨🇳 China
  • Country Total Rank 7,385
  • Country Ranking
    Perl
         12
    C++
         527

Top repositories

1

PopLDdecay

PopLDdecay: a fast and effective tool for linkage disequilibrium decay analysis based on variant call format(VCF) files
C++
186
star
2

LDBlockShow

LDBlockShow: a fast and convenient tool for visualizing linkage disequilibrium and haplotype blocks based on VCF files
Perl
136
star
3

Reseqtools

A Toolkit for analyzing next-generation DNA Re-Sequencing data
81
star
4

VCF2Dis

VCF2Dis: A new simple and efficient software to calculate p-distance matrix and construct population phylogeny based Variant Call Format
C++
79
star
5

RectChr

Multi-level visualization of genomic statistical variables on rectangular chromosomes
Perl
79
star
6

BamDeal

BamDeal: a comprehensive toolkit for bam manipulation
C++
52
star
7

FxTools

FxTools: a comprehensive toolkit for FASTA and FASTQ file manipulation
C++
30
star
8

RRSelection

RRSelection: A linkage disequilibrium method to detect selection region across population VCF
C++
12
star
9

gcaPDA

gamete cell assisted chromosome-scale phased diploid assembler
Perl
5
star
10

BamSplit

A efficient software tools to split Bam form all chromosome together to each chr one bam
5
star
11

BamCoverage

BamCoverage: A efficient software tools to calculate every site depth of genome based bam files
5
star
12

SoapNewCov

SoapNewCov: A efficient software tools to Calculate site depth of genome based soap
2
star
13

soap2bam

soap2bam: A efficient software tools to convert soap to bam format
2
star