Artificial Intelligence in Medicine (AIM) Program (@AIM-Harvard)
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AIM-Harvard

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Top repositories

1

pyradiomics

Open-source python package for the extraction of Radiomics features from 2D and 3D images and binary masks. Support: https://discourse.slicer.org/c/community/radiomics
Jupyter Notebook
1,120
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2

SlicerRadiomics

A Slicer extension to provide a GUI around pyradiomics
Python
105
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3

foundation-cancer-image-biomarker

Code and evaluation repository for the paper
Jupyter Notebook
71
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4

DeepCAC

Fully automatic coronary calcium risk assessment using Deep Learning.
Python
36
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5

SDoH

Large Language Models to Identify Social Determinants of Health in Electronic Health Records | Paper: https://www.nature.com/articles/s41746-023-00970-0
Python
36
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6

DeepContrast

A deep learning-based fully-automatic intravenous contrast detection tool for head-and-neck and chest CT scans.
Python
20
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7

ChatGPT_NCCN

Code base, outputs, scoring guidelines and annotations for ChatGPT NCCN evaluation | Paper: https://jamanetwork.com/journals/jamaoncology/fullarticle/2808731
16
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8

TotalSegmentator-to-nnUNet-format-convert

Convert the TotalSegmentator dataset into the nnUNet format
Python
12
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9

CXR-Lung-Risk

Deep learning to estimate lung-related mortality from chest radiographs.
Jupyter Notebook
8
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10

DL-RT-segmention

Clinical validation of the DL-RT segmention
6
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11

DeepHeartRO

Python
5
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12

SlicerMHubRunner

Beta Version. Browse and run all mhub models directly within 3D Slicer.
Python
5
star
13

OncQA

The effect of using a large language model to respond to patient messages ｜ Paper: https://arxiv.org/abs/2310.17703
5
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14

pyradiomics_ibsi-benchmark

Small package containing code to compare PyRadiomics features to the IBSI benchmark
Python
4
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15

onc-ai-factsheet

4
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16

bodycomp

Python
3
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17

Eso_alpha

Deep Learning-Based Natural Language Processing to Automate Esophagitis Severity Grading from the Electronic Health Records | Paper: https://arxiv.org/pdf/2303.13722.pdf
Python
3
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18

NLP_CancerSDoH

NLP methods to explore SDoH underyling cancer disparities
Jupyter Notebook
2
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19

fake2real

Python
2
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20

body-composition

Python
1
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21

aimi_alpha

AIMI (alpha).
Jupyter Notebook
1
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22

mhub

Repository for the mhub project.
Jupyter Notebook
1
star
23

FaceAge

Decoding biological age from face photographs using deep learning.
Jupyter Notebook
1
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